This paper aims to examine the Intellectual Property Right in accordance with the change of the service sector authority of the Common Commercial Policy after the Lisbon Treaty. Recently, issues on trade-related are came to a head in EU. For a discussion of various issues made ​​uncomfortable relationship between the European Commission and the Member States, and it is closely related on common 'competence' or 'power'. The Treaty of Lisbon introduced a number of significant institutional and substantial changes in the law governing the external relations of the European Union. As a result, Intellectual Property Rights was included within the scope of the European Union's exclusive competence, which had been the EU and individual Member States' shared rights. However, the debate over exclusive competence of commission on Intellectual Property Rights remains controversial, and there are still many parts to be protected at the member states level. In particular, it is unclear that European Patent with Unitary Effect enter into force due to the UK withdrawal from the European Union. Meanwhile, the Lisbon Treaty has significantly enhanced the competences of the European Parliament by introducing the ordinary legislative procedure instead of elimination of national parliaments ratification on the decision making process of the CCP. The analysis of impacts of the Lisbon Treaty to the CCP that could occur new problems like issues of national sovereignty and the democratic deficit. This paper purports to uncover that the Intellectual Property Right protection system of the EU brings conflict between exclusive competence of the Commission and interests of Member States despite the Lisbon Treaty.